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Technologies / Software Development

Fiji - Introduction to Scientific Image Processing

The training introduces participants to the world of scientific image processing using the Fiji platform (Fiji Is Just ImageJ). The program covers fundamental and advanced image analysis techniques used in scientific research. Participants learn to process, analyze, and quantify images from various sources including microscopy, medical imaging, and other scientific applications. Classes combine theory with intensive practical workshops.

Required Participant Preparation

  • Basic computer skills

  • Understanding of scientific image concepts

  • Familiarity with research methodology

  • Basic knowledge of statistics

Benefits

  • Participants will acquire practical skills in scientific image processing and analysis
  • They will learn to use Fiji tools for various research applications
  • They will gain knowledge of image segmentation and quantification techniques
  • They will develop skills in automating repetitive analysis tasks
  • They will learn to extract meaningful data from image datasets
  • They will understand best practices for reproducible image analysis

Who is this training for?

Scientists working with image data
Biotechnologists and biologists
Medical imaging specialists
Research data analysts
Laboratory technicians
Microscopy specialists
PhD students and researchers

Training program

01

Interface and navigation

  • Image formats and types
  • Basic operations and tools
  • Image preprocessing
  • Image processing techniques
  • Filtering and enhancement
  • Segmentation methods
  • Morphological operations
02

Noise reduction

  • Analysis and measurement
03

Particle analysis

  • Object counting
  • Intensity measurements
  • Colocalization analysis
  • Automation and scripting
04

Macro programming

  • Batch processing
  • Plugin development
  • Workflow automation

Delivery Methods

Online

  • Convenience of participating from anywhere
  • Interactive live sessions with trainer
  • Materials available for 30 days
  • No travel costs

On-site

  • Direct contact with trainer and group
  • Intensive hands-on workshops
  • Networking with other participants
  • Full focus on learning

Frequently asked questions

What are the prerequisites for this training?

The Fiji - Introduction to Scientific Image Processing training does not require specialized prior knowledge. Basic IT knowledge is sufficient.

What is the format and duration of this training?

The training lasts 2 days and is available in online and on-site format. Sessions run from 9:00 AM to 4:00 PM. We can also customize the schedule to fit your team's needs.

Who is this training designed for?

This training is designed for: Scientists working with image data; Biotechnologists and biologists; Medical imaging specialists.

Klaudia Janecka
Klaudia Janecka Opiekun szkolenia

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Funding Options

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Up to 80%

Development Services Database

Up to 80% funding for SMEs from EU funds

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Up to 100%

National Training Fund

Up to 100% funding for employers

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ING Bank - EITT client
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PKO Bank Polski - EITT client
PZU - EITT client
Allianz - EITT client
T-Mobile - EITT client
KGHM - EITT client
PGE - EITT client
IKEA - EITT client
InPost - EITT client
Leroy Merlin - EITT client
ZUS - EITT client

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